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Hello there, dfmmjones. Thanks for getting back here.
The newly modified email message in the template takes over and replaces with all existing invoice template messages.
I see how ideal and useful to edit the email message without affecting other templates in QuickBooks. For now, you may consider checking our blog website to keep up-to-date about the enhanced and the other release features in QuickBooks.
Please let me know if you need anything else. Keep safe.
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