Multiple Deposits on reports for same invoice

Hi  I'm new to quickbooks and need help!

I set up company with Chequing and Savings accounts. Connected to my bank. Started invoicing and adding expenses. All seemed good.

I realized later I didn't set the company start date to 01.01.2024 and so the banking transactions went back earlier than i wanted.

I made those accounts inactive and disconnected from bank to try and start again, and created new accounts. However, now, any payments I've already received are already connected to Invoices, and when i try to add them in the transactions panel, to categorize the transaction the Sales Tax reports show the invoice and a DEPOSIT - effectively doubling the payments  - how can I resolve this?

thanks'

Jake