Hi there Sasha89,
Making sure your remittance payments are correctly accounted for is important for your books to balance. QuickBooks Online payroll is a great tool to be able to keep track of how much you've paid your employees. I can provide some insight into this.
The remittance payments in QuickBooks Online are unable to be marked as paid by a Credit card account. One way around this would be to choose a Bank account as the payment account for the Payroll tax payment, then make a transaction such as a Transfer or a Journal Entry to move money from the Credit card account into that Bank account.
I can see how this feature would help make tracking those payments easier within QuickBooks Online. I recommend leaving feedback by clicking on the Gear icon, then Feedback. Comments made in this section are taken into consideration when the developers are designing new features for QuickBooks Online.
If you have any other questions, feel free to reach out here.