hi fernando.lanyog
Thank you for contacting Community.
If you have filed your VAT return within QuickBooks and the system already has it marked as filed in the taxes section, you can record the payment or refund there. To do this...
1. Click on 'Taxes' on the left of your QuickBooks account.
2. Locate the return under the Submitted or Filed section.
3. Click on the drop down arrow at the end of the line and select 'Record Refund'.
4. Fill out the required information and click 'Save'.
This will then record the payment as being refund to which ever bank account you selected.
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