Paying Employees a Percentage of Customer Invoices Paid

I'd be pleased to guide you in creating a payroll item to easily track sales commissions by employees from paid invoices, eklee.

We can start by setting up a commission-pay type by following the steps below:

1. Go to the Lists menu, then select Payroll Item List.
2. On the Payroll Item ▼ dropdown, click New.
3. Choose Custom Setup, then Next.
4. Pick Wage, then Next.
5. Select Commission, then Next.
6. Enter the item name, then Next.
7. Determine the Expense account where you want to track the item, then Next.
8. Hit Finish.

Next, add the item to your employee’s profile:

1. Go to Employees, and then select Employee Center.
2. Double-click the name, then click Payroll Info. 
3. In the Earnings section, add the payroll item you created and then tap OK.

Additionally, you can assign a class after adding the pay type as a line item from their profile. This way, it's easier to track accurate reporting of commission.

Once done, proceed to Step 2: Pay your employees a commission depending on whether it's the only matter in a paycheck or with their regular pay: Pay your employees a commission.

Moreover, it would be best to create and run your payroll reports to track your employees’ commissions efficiently. From there, you can check all recorded transactions.

Furthermore, I recommend consulting with your accountant to ensure these transactions are correctly accounted for.

I can provide more helpful information about generating paychecks for employees. If you need further assistance in managing invoices, leave a comment below. I'll get back to you at any time.