payroll types not syncing with quickbooks time

I have two different types of time that I track for my employees (office vs. warehouse time) because I want these to show up in different parts of the P&L (I have them mapped differently in the payroll settings).  this works fine when I manually enter hours into payroll, but I just set-up quickbooks timesheets and the timesheets don't give me the option to track these seperatly.  In fact for one employee, I don't even see an option to record her PTO (its not an option in the mapping within timesheets) even though it is set up as a pay type in payroll and has been synced.  Is there the ability to track these different pay types in sheets?