QBO integration with Square Payroll; entering manual checks

Hello QBO Community,

Square Payroll recommends printing manual checks from the provided PDFs, rather than entering them into QBO to avoid overstating wages. However, we would rather enter checks in QBO; one reason is to save on the cost of purchasing new checks. We are not sure how to change Square's journal entry without affecting payroll totals. Any ideas on how to do this would be greatly appreciated.

Thank you for your help.