Thanks for pointing this out, BoomBoom23.
Instead of the Create another check option, you can use the Bonus only option to record payroll for your employee who got a raise.
I'd also like to share the reasons to create a separate bonus check instead of adding it to a regular paycheck:
- Control the tax treatment of a bonus. Or the withholding of retirement account deductions.
- Turn off a direct deposit for the bonus check.
- You are paying the bonus off-cycle. Not on a regularly scheduled payday. (You can use a bonus check to pay back wages or underpaid wages.)
- Your employee has accumulated $1,000,000 or more in supplemental wages and you are required to withhold federal taxes at 37%.
- Deliver the bonus check as a special event to the employee. Create a separate bonus paycheck.
To create Bonus only payroll:
- Go to Payroll and choose the Employee tab.
- Click Run payroll.
- Select Bonus only.

- Fill in the necessary information.
- Click Save and close.
Since your employee got a raise, you'll want to update his/her payroll rate. For additional information about updating employee's information in QuickBooks Online, check out these articles:
I've also included an article that you can read to help track your employee and payroll expenses in QuickBooks: Run payroll reports.
Get back to me if you have any other payroll questions in mind. I'm always here to help. Have a good day.