How do I transfer the money laying dormant here on quickbooks from invoices paid into my business checking account(which isn’t a quickbooks bank account)?

Hello there, sagewindbodywork.

When mistakenly assigned the standard deposit to a dormant account, which is your business checking, then it's been set up to the QuickBooks Online Chart of accounts.

To correct this, you'll have to transfer funds using the transfer feature to move the accumulated amount from their Business Checking to their correct bank account. Then correct your payment deposit set up for future transactions. You'll have to update their Chart of Accounts standard deposit account by following these steps.

Here's how:

1. Login to QuickBooks Online
2. Click the Gear Settings in the upper right corner.
3. Select Account and Settings.
4. Then Payments.
5. Chart of Accounts, click the Pencil Icon and choose the correct bank account from the Standard deposit's drop-down.

Furthermore, you can learn the reconciliation workflow in QuickBooks to understand how to start, fix, and edit reconciliations.

You can always count on me if you need a hand with undeposited fund accounts or any QuickBooks related. Assistance is just one click away. You have a good one.