Thank you for sharing additional information, @janet77.
Allow me to provide information about the limitations when converting files from QuickBooks Desktop to QuickBooks Online.
Please know that the estimates used for progress invoicing won’t link to the invoices you created in Desktop. Thus, it's the reason why estimates are unlinked to the invoices after converting the file. To get rid of the open balances on your estimates, you can change the status to Closed. This won't affect your balances since the estimate is a non-posting transaction. Here's how:
- Sign in to your QuickBooks Online (QBO) account.
- Click Sales from the left menu, then select All Sales.
- Find the estimate from the list.
- In the Action column, select Update status from the drop-down.
- Select Closed, then click OK.
I'm adding this article for more guidance: Update an estimate's status.
You might also want to learn more about what data doesn't convert when you migrate from QuickBooks Desktop to QuickBooks Online. This article will provide you with detailed information: What to expect when you switch from QuickBooks Desktop to QuickBooks Online.
Please let me know if you need clarification about this, or there's anything else I can do for you. I'll be standing by for your response, @janet77.
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